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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs11919352 chr3:90015493 A/G MTERFD1 chr8:97251626-97273838:- -0.71 -6.05 3.42E-9 Box Plot
BLCA rs11927621 chr3:25259265 C/T LOC100130932 chr19:14599758-14600688:+ -0.35 -6.4 4.57E-10 Box Plot
BLCA rs11927621 chr3:25259265 C/T POU2F1 chr1:167190066-167396582:+ -0.38 -6.38 5.14E-10 Box Plot
BLCA rs11927621 chr3:25259265 C/T RPL13AP3 chr14:56232895-56234435:+ -0.35 -7.03 9.71E-12 Box Plot
BLCA rs11933433 chr4:44095904 G/T SSH3 chr11:67070919-67080078:+ 0.27 5.99 4.96E-9 Box Plot
BLCA rs11938098 chr4:57461610 C/T C9orf46 chr9:5357973-5630071:- 0.74 6.63 1.16E-10 Box Plot
BLCA rs11938098 chr4:57461610 C/T HAUS6 chr9:19053141-19103117:- 0.64 6.74 5.73E-11 Box Plot
BLCA rs11938098 chr4:57461610 C/T JAK2 chr9:4984390-5128183:+ 0.56 6.12 2.31E-9 Box Plot
BLCA rs11938098 chr4:57461610 C/T KDM4C chr9:6720863-7175648:+ 0.86 6.76 5.11E-11 Box Plot
BLCA rs11938098 chr4:57461610 C/T KIAA1432 chr9:5629025-5776557:+ 0.67 6.87 2.65E-11 Box Plot
BLCA rs11938098 chr4:57461610 C/T KIAA2026 chr9:5881596-6007901:- 0.89 8.66 1.29E-16 Box Plot
BLCA rs11938098 chr4:57461610 C/T RANBP6 chr9:6011043-6015625:- 0.73 6.41 4.37E-10 Box Plot
BLCA rs11938098 chr4:57461610 C/T RPS6 chr9:19375713-19380252:- 0.65 6.61 1.25E-10 Box Plot
BLCA rs11948289 chr5:99617444 T/G CT47A9 chrX:120077415-120080737:- 0.23 7.03 9.63E-12 Box Plot
BLCA rs11949435 chr5:176714932 C/G LOC388955 chr2:63849182-63850159:- 0.52 11.7 3.15E-27 Box Plot